Suite2P
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cortex-lab
Tools for processing 2P recordings
Hi developers, I noticed that in the spike deconvolution stage, specifically in GUI, the deconvolution seems to be weird, having multiple spikes even in the relaxing phase. If I do...
Hi, I provide support to researchers in a neuroscience institute. One of our users is trying to run suite2p using the multiplane_parallel option. We understand that we have to pass...
Hi suite2p community - I have a small issue I am hoping people can help me out with. We are using the MATLAB based suite2p along with Scanbox for image...
Hi, now my lab is using GCaMP8 version instead of GCaMP6 for two-photon imaging. Since the decay time of GCaMP8 is faster than GCaMP6 and also if my understanding is...
it seems to require functions like `getOR `
Dear all! I have an issue with the code. I made everything according to the description, the pipeline run through without any problem, but when I try to run the...
Hello. I tried to append this comment into issue #121 which addressed some aspects of the problems with uint16 data. But I guess since it is closed I'll need to...
Hi! I upgraded suite2p and tried to set up a batch process. I am able to set up the first data set with "save settings and add more (batch)," but...
Hello, I had a question regarding how to interpret the results of the python suite2p deconvolution. It's not clear to me what the y-axis of the deconvolution result means. Is...
Hello. I'm quite new to this field. I was wondering what data should be used as input to "OASISpreprocess.m". Raw fluorescence measurement (F) or ΔF/F?
