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List Matlab toolboxes needed for Kilosort in Readme

Open oliche opened this issue 7 years ago • 3 comments

Hello, Could there be a round up of the dependencies needed to run Kilosort in the readme ? So far I can see Statistics and Machine Learning Toolbox and Parallel Computing Toolbox, but there could be more.

Best Regards

oliche avatar Oct 30 '18 14:10 oliche

Which functions are from the Statistics and Machine Learning Toolbox? I think we are also using signal processing for filtering the data.

marius10p avatar Nov 17 '18 02:11 marius10p

make_eMouseData(fpath, useGPU); To use 'geornd', the following product must be licensed, installed, and enabled: Statistics and Machine Learning Toolbox

Error in make_eMouseData (line 44) dspks = int64(geornd(1/(fs/fr(j)), ceil(2*fr(j)*t_record),1));

oliche avatar Nov 21 '18 14:11 oliche

I see. You can replace those random numbers with any other positive distribution on the integers as long as you keep mean firing rates roughly the same.

marius10p avatar Nov 21 '18 15:11 marius10p