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mosea.py scan

11

Hello I have been trying to run MoSEA/mosea.py scan on the test files and I get this error. python MoSEA/mosea.py scan --pfm --pfm_path MoSEA/test_files/motifs/pfms/ --fasta fafile_reg --out_dir fmopfm_outdir --count scanning...

sk1350

strand information for MoSEA not using SUPPA2 events

4

Dear team, May this email finds you all fine. I have a question related to using MoSEA using coordinates from a tool different than SUPPA2. my question is should I...

JamalEH

Dear all, Thank you for sharing with us the R script to make perfect visualization of MoSEA outputs. While trying the script on the test file I got the following...

JamalEH

ctrl_events_ids & reg_events_ids files

6

Dear Eduardo, First of all, thank you so much for sharing your expertise with us! I have a simple question about the two input files used in step A of...

JamalELH

variable event support

4

Will variable SUPPA events be supported?

PeterVenhuizen

Command is not defined

1

Hi ! I continue having this same message : python /Dataset/AS_MDA/MoSEA-master/mosea.py scan   --pfm   --fasta test1.fa   --out_dir /Dataset/AS_MDA/fmo_outdir   --pfm_path /Dataset/AS_MDA/MoSEA/test_files/motifs/pfms   Error in parsing: name 'commands' is not defined usage: mosea.py [-h]...

Djoudjou2