morpheus.R

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C stack usage is too close to the limit. Bigger matrices.

1

I am trying to use morpheus.R to generate some heat maps for larger matrices 2500 x 2500, but I get an error of "C stack usage is too close to...

Dekermanjian

Hello, I'm trying to export the heatmap to an HTML file and everything works fine except for some of the tools from the Tools tab. When I try to run,...

michael-kotliar

How to do Hierarchical Clustering in R like use web results?

1

Hi, I used morpheus https://software.broadinstitute.org/morpheus/ It's a good tool to make heatmap! but I need to automatically generate pictures. So, I used Morpheus.js-based heat map widget in R. https://github.com/cmap/morpheus.R but...

yubau1112

Hi: I have a couple of projects with Shiny in which I want to add now some visualization using morpheus. However, they started to give me an error related to...

smdb21

Matrix rendering much faster when NOT using the shiny wrapper

2

Hi, we've noticed the matrix rendering (say matrix(rnorm(200000), 10000)) is very slow using morpheus(x) in shiny, but rendering from a text file opened via what looks like a morpheus iframe...

katsikora

Run kmeans clustering on init

1

Can I run kmeans clustering on initializing the morpheus object?

shashj

Hello, I'm also getting this C stack limit message, or "Error: protect(): protection stack overflow"/"Error: segfault from C stack overflow" if I increase my OS ulimit to something larger. I'm...

robert-player