rmsd
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Willing to add the rmsd value to title line?
Sometimes I am interested in knowing the rmsd value for the modified structure. Now I need to run calculate_rmsd.py twice (with and without -p). With this simple change the rmsd value is printed in the title line of the xyz file.
line 2052 from: xyz = set_coordinates(q_all_atoms, q_coord, title=f"{settings.structure_b} - modified") to xyz = set_coordinates(q_all_atoms, q_coord, title=f"{settings.structure_b} - modified. RMSD = {result_rmsd}")