FUNGuildR

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Hello, I'm having some problems connecting to the server, using both `funguild_assign()` and `get_funguild_db()`. The error that appears is this: Error in curl::curl_fetch_memory(url, handle = handle) : Failed to connect...

PeBarcik

FUNGuild databased down

1

Hi, I am having trouble downloading the database/running the code. I am wondering if the FUNGuild database is down at the moment and if there is an ETA for when...

hwangumn

After assigning trophic modes and guilds to my ITS sequencing data, I have noticed that some of the assignments for Trophic Mode list multiple trophic modes, for example "Pathotroph-Saprotroph-Sybiotroph," which...

mwhite942

pipe simbollogy in the guild column

3

Dear FUNGuildR creators, I have a simple question: what the pipe sign "|" means in the values of the guild column? Maybe I am wrong but i cannot find any...

gianINTERN

Misassignment of selected taxa

3

Hello, I have run FUNGuild on a taxonomy table extracted from a phyloseq object, using the following code: Taxa_processed

igrowontrees

in this link: https://github.com/brendanf/FUNGuildR/blob/master/inst/CITATION The URL is for url = "https://CRAN.R-project.org/package=FUNGuildR") but that doesnt exist. great program BTW. I used it with just a single column dataframe (genera name) and...

EzOrlo