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Incorrect genotype conversion

Open ValiumBear opened this issue 2 years ago • 0 comments

Some variants have incorrect genotype in the result. Example with rs2235544: 23andme CSV: CC GeneCodex result: AA More SNPs: rs1801282 (CC vs CG), rs7754840 (CG vs CC)

https://snpedia.com/index.php/Orientation https://snpedia.com/index.php/Ambiguous_flip

Not sure it can be fixed.

ValiumBear avatar Jan 11 '24 04:01 ValiumBear