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An open source digital holographic microscopy toolkit in Python.

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To whom it may concern, If you are using https://github.com/astropy/ci-helpers in your appveyor.yml , please know that the Astropy project has dropped active development/support for Appveyor CI. If it still...

I ran the shampoo.test() when the shampoo installation completed in linux,a issue named "Module Not FoundError :No module named 'astropy.tests.pytest_plugins'",why?how should i deal with it?

I run shampoo.test() and get an error. Could someone help me fix this problem? It says **TypeError: 'float' object cannot be interpreted as an index** ![image](https://user-images.githubusercontent.com/28746110/38023038-c2601674-32b3-11e8-87de-51404469e900.png) ![image](https://user-images.githubusercontent.com/28746110/38023055-d00c63fe-32b3-11e8-932f-1f5513b4bd13.png)

when i try run the demo use fro my picture, the error is coming. of course, I have modified some parameters. for example, wavelength、dx and dy ... so, Can you...

This is my first attempt at using shampoo. I am getting the following error with the `USAF_test.tif` in the repo: >\Anaconda3\lib\site-packages\shampoo-0.1.dev156-py3.5.egg\shampoo\reconstruction.py:419: RuntimeWarning: invalid value encountered in sqrt np.sqrt(1.0 - first_term...

This has been discussed extensively, and Brett suggested the following hierarchy: /t0000/hologram /t0000/wavelength0/intensity /t0000/wavelength0/phase /t0000/wavelength0/fourier_mask /t0000/wavelength1/intensity /t0000/wavelength1/phase /t0000/wavelength1/fourier_mask … /t0001/hologram /t0001/wavelength0/intensity /t0001/wavelength0/phase /t0001/wavelength0/fourier_mask ... Let's discuss the practical implementation of...

The current implementation of shampoo doesn't account for the magnification of the main objective, so the propagation distances aren't correct. The propagation distance should be divided by the square of...

feature request

Talking with @gshowalt, we isolated some places where the documentation could be fleshed out more. Let's make a list here of the docs we would like to have. * tutorial...

feature request

Let's double check that we're using `atan2` efficiently everywhere.

question

In the weekly telecon, @LaurentRDC requested, and @jkentwallace seconded the request, to: 1. Make a more general interface to the Fourier mask, such that the mask is an attribute that...

feature request