methpat
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bjpop
A program for summarising CpG methylation patterns
It is unclear from the readme file (or from the article) what is the coordinate system used for the .tsv file describing the amplicons (0-based or 1-based, or mixed like...
This would allow editing for adjustements of figure presentation for publications.
Sometimes it is useful to label coordinates negative to a given origin (for example TSS).
Would it be possible to display the haplotypes horizontally? (to follow a more traditional way to show methylation data)
