JDLL icon indicating copy to clipboard operation
JDLL copied to clipboard

Workaround for SSL exception when downloading models from zenodo.org

Open stefanhahmann opened this issue 1 year ago • 0 comments

Downloading from Zenodo sometimes resulted in the following exception: java.security.cert.CertificateException: No subject alternative DNS name matching zenodo.org found

  • There is a workaround for this exception described here: https://stackoverflow.com/questions/19540289/how-to-fix-the-java-security-cert-certificateexception-no-subject-alternative
  • The workaround seems to disable the secure connection. However, since we are downloading data that is public anyway from Zenodo this may not be an issue here

@carlosuc3m I was having the same problem again as I had shown during the hackathon, when trying to download models from Zenodo:

StarDist3D: javax.net.ssl.SSLHandshakeException: No subject alternative DNS name matching zenodo.org found.
java.lang.RuntimeException: javax.net.ssl.SSLHandshakeException: No subject alternative DNS name matching zenodo.org found.
	at io.bioimage.modelrunner.bioimageio.download.DownloadModel.getFileSize(DownloadModel.java:605)
	at io.bioimage.modelrunner.bioimageio.download.DownloadModel.getModelSizeFileByFile(DownloadModel.java:581)
	at io.bioimage.modelrunner.bioimageio.download.DownloadTracker.<init>(DownloadTracker.java:174)
	at io.bioimage.modelrunner.bioimageio.download.DownloadTracker.getBMZModelDownloadTracker(DownloadTracker.java:198)
	at io.bioimage.modelrunner.bioimageio.BioimageioRepo.downloadModel(BioimageioRepo.java:502)
	at io.bioimage.modelrunner.bioimageio.BioimageioRepo.downloadByName(BioimageioRepo.java:605)
	at io.bioimage.modelrunner.model.Stardist3D.fromPretained(Stardist3D.java:125)
	at io.bioimage.modelrunner.model.Stardist3D.fromPretained(Stardist3D.java:106)
	at org.mastodon.tracking.detection.StarDist3DDetectorPlugin.detect(StarDist3DDetectorPlugin.java:89)
	at org.scijava.ui.behaviour.util.RunnableAction.actionPerformed(RunnableAction.java:47)
	at java.desktop/javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1967)
	at java.desktop/javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2308)
	at java.desktop/javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:405)
	at java.desktop/javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:262)
	at java.desktop/javax.swing.AbstractButton.doClick(AbstractButton.java:369)
	at java.desktop/javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1020)
	at java.desktop/javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1064)
	at java.desktop/java.awt.Component.processMouseEvent(Component.java:6632)
	at java.desktop/javax.swing.JComponent.processMouseEvent(JComponent.java:3342)
	at java.desktop/java.awt.Component.processEvent(Component.java:6397)
	at java.desktop/java.awt.Container.processEvent(Container.java:2263)
	at java.desktop/java.awt.Component.dispatchEventImpl(Component.java:5008)
	at java.desktop/java.awt.Container.dispatchEventImpl(Container.java:2321)
	at java.desktop/java.awt.Component.dispatchEvent(Component.java:4840)
	at java.desktop/java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4918)
	at java.desktop/java.awt.LightweightDispatcher.processMouseEvent(Container.java:4547)
	at java.desktop/java.awt.LightweightDispatcher.dispatchEvent(Container.java:4488)
	at java.desktop/java.awt.Container.dispatchEventImpl(Container.java:2307)
	at java.desktop/java.awt.Window.dispatchEventImpl(Window.java:2772)
	at java.desktop/java.awt.Component.dispatchEvent(Component.java:4840)
	at java.desktop/java.awt.EventQueue.dispatchEventImpl(EventQueue.java:772)
	at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:721)
	at java.desktop/java.awt.EventQueue$4.run(EventQueue.java:715)
	at java.base/java.security.AccessController.doPrivileged(Native Method)
	at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:85)
	at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:95)
	at java.desktop/java.awt.EventQueue$5.run(EventQueue.java:745)
	at java.desktop/java.awt.EventQueue$5.run(EventQueue.java:743)
	at java.base/java.security.AccessController.doPrivileged(Native Method)
	at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:85)
	at java.desktop/java.awt.EventQueue.dispatchEvent(EventQueue.java:742)
	at java.desktop/java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:203)
	at java.desktop/java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:124)
	at java.desktop/java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:113)
	at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:109)
	at java.desktop/java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
	at java.desktop/java.awt.EventDispatchThread.run(EventDispatchThread.java:90)

stefanhahmann avatar Apr 26 '24 12:04 stefanhahmann