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Create dataset loader for n2c2 2014 - Deidentification & Heart Disease

Open jason-fries opened this issue 3 years ago • 6 comments

Adding a Dataset

  • Name: n2c2 2014 - Deidentification & Heart Disease
  • Description: None provided
  • Task: NER,DOC_CLASS
  • Paper: https://pubmed.ncbi.nlm.nih.gov/26225918/
  • Data: https://portal.dbmi.hms.harvard.edu/projects/n2c2-nlp/
  • License: DUA-C/NC

jason-fries avatar Mar 22 '22 00:03 jason-fries

#self-assign

jdposada avatar Apr 01 '22 18:04 jdposada

Hi @jdposada can you let us know if you are still working on this so we can update our project board? Please just notify us the status by Friday April 8. You can response to this comment or ping us on Slack or Discord.

No worries if you are not finished but still intend to work on this!

jason-fries avatar Apr 07 '22 22:04 jason-fries

hi @jason-fries ,

I am still working on this. Actually working with someone else. How can I give him credit as well?

jdposada avatar Apr 08 '22 18:04 jdposada

@jdposada as mentioned in a different issue with @jason-fries you can opt to either have both your names on the script as co-authors or ideally, your two commit histories tied to two separate GitHub accounts. We are fine with either option.

hakunanatasha avatar Apr 09 '22 21:04 hakunanatasha

New PR linked only for the deid task

https://github.com/bigscience-workshop/biomedical/pull/644

jdposada avatar May 28 '22 00:05 jdposada

New PR linked for the risk factors task

https://github.com/bigscience-workshop/biomedical/pull/646

jdposada avatar May 28 '22 12:05 jdposada