physlr
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bcgsc
:chains: Construct a Physical Map from Linked Reads
This is due to `scipy` and `networkx` conflicts. **Solution:** As a workaround, I figured out that we should **either** have `scipy` and `networkx` recent versions, `scipy v1.8` at least **or**...
Hello, I'm trying to install Physlr with Conda + Pypy 3.9 and I get the following error: ``` LibMambaUnsatisfiableError: Encountered problems while solving: - package physlr-1.0.4-py39h2df963e_0 requires tqdm, but none...
Hello, I'm interested in incorporating this tool into [Harpy](https://www.github.com/pdimens/harpy), which is specific to haplotagging-style linked reads. The documentation provides the option for 10x and stFLR protocol types, but not other...
Hello, I encountered an error of `Error 137` (see log output below). Do you have any insights what might cause the issue? Thanks! ``` ... Processed 70000000 kmers. Processed 70100000...
I am attempting to install your software into a cluster in a GNU environment module, loading other modules for its dependencies. But this line breaks that modularity: https://github.com/bcgsc/physlr/blob/4d32a9924df024b6e69937fb2d4cec781168e243/bin/physlr-make#L41 Must it...
