arbor
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arbor-sim
The Arbor multi-compartment neural network simulation library.
SDE
# Stochastic Differential Equations Introduces sources of white noise to arbor (and nmodl) and addresses issues #1643 and #1655. Both point and density mechanisms may now use white noise as...
- Enhance `run_cpp_examples.sh` to do some very basic checking of spikes counts - Add a script to check all releases - The former must succeed for all commits to master...
Several variants of the synapses can be found here: https://github.com/dbbs-lab/dbbs-mod-collection/tree/master/dbbs_mod_collection/mod * AMPA_0 * AMPA_granule * GABA_0 * GABA_biexp * GABA_granule * NMDA_granule * NMDA_stellate. These mechanisms employ the use of...
Typical computational neuroscience models, like LIF and AdEx, restrict the membrane voltage to below the threshold. To allow to replicate results, e.g., the AdEx Naud patterns (https://dx.doi.org/10.1007%2Fs00422-008-0264-7), it is crucial...
Hi! I'm on `bb723be670f3b5a85da8b40d0e41fe0a18f240b5` and have the following start for the implementation of a Graupner/Brunel mechanism: ``` NEURON { POINT_PROCESS graupner_brunel } INITIAL { c = 0 rho = 0...
We have no checkpointing support, but it sure would be good to have. Nothing concrete here on this issue: open to collecting comments regarding use cases, design ideas, etc.
For examples and short scripts [1], and possibly larger ones as well, it would be nice to have `arbor.simulation.samples` return data from all ranks, not just its own. In C++,...
Mechanisms of the `POINT_PROCESS` variety no longer apply `weight` to concentrations `Xo`/`Xi` Fixes #1848
We will remove support for the following in ~0.7~ 0.8 - [x] python 3.6. EOL reached - [ ] CUDA 10 - [ ] GCC 8 - [ ] Clang...
- Make symbolic differentiation return a more refined type. - Catch said error when trying to test for linearity - Catch the propagated error in CNExp and recommend using a...