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CLI(Command Line Interface)

Open imanmousaei opened this issue 2 years ago • 1 comments

How can I use this tool using terminal? For instance, in Juicer we can use juicer.sh [options]. I want to plot a heatmap from a .hic file using python or CLI.

imanmousaei avatar Jun 20 '23 19:06 imanmousaei

Hopefully this can help someone even though it's a year late! Try java -jar [juicebox.jar]

  • Ensure you have Java downloaded
  • Replace [juicebox.jar] with the path to your particular Juicebox installation

amulyagarimella avatar Jul 02 '24 14:07 amulyagarimella