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'export_pseudobulk' output difference log

Open GGboy-Zzz opened this issue 1 year ago • 1 comments

Hi, I processed a batch of scATACseq data using pycistopic last year, at that time, the export_pseudobulk output in the juypter lab is as follows, image yet, When I was using pycistopic recently, the export_pseudobulk output changed to image Both generated pseudobulk bed files for each cell type. I'm confused about its change, because I dont update it. So, I would like to ask if this output is normal?Thanks for your reply.

GGboy-Zzz avatar Sep 23 '24 05:09 GGboy-Zzz

The implementation of export_pseudobulk was rewritten to be faster, hence the slightly different logging lines.

ghuls avatar Oct 01 '24 08:10 ghuls