meddlr
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ad12
A flexible ML framework built to simplify medical image reconstruction and analysis experimentation.
Pull request comparing 2D-motion-corruption-main from my meddlr to meddlr's main branch.
Function returned None overwriting cfg as None.
Hey, We were using meddlr for training a recon + segmentation model using a sum of MAE (for recon) and the builtin functional [dice_score](https://github.com/ad12/meddlr/blob/1a1bb86f2548785a8d135c78c5a6be123e8f4506/meddlr/metrics/functional/sem_seg.py#L36-L59). However, during training DSC was not...
FAILED tests/utils/test_path.py::test_gdrive_handler - ImportError: cannot import name 'client' from 'gdown.download_folder' (/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/site-packages/gdown/download_folder.py)
Calling `sigpy.mri.poisson` hangs during the data loading process, but copying the function seems to be running fine. Things to check: - [ ] Implementation differences between current sigpy implementation and...
Medical images have a heterogenous number of dimensions. For example, MRI volumes can be treated as 2D slices, 3D volumes, or nD tensors (e.g. multi-echo, time, etc.). It is important...
 ### Snyk has created this PR to fix 1 vulnerabilities in the pip dependencies of this project. #### Snyk changed the following file(s): - `docs/requirements.txt` ⚠️ Warning ``` sphinx-panels...
 ### Snyk has created this PR to fix 5 vulnerabilities in the pip dependencies of this project. #### Snyk changed the following file(s): - `requirements.txt` ⚠️ Warning ``` torchmetrics...