Artem Babaian
Artem Babaian
SBT template is below: [Serratus_template.sbt.txt](https://github.com/ababaian/serratus/files/4904550/Serratus_template.sbt.txt)
Everything is possible with enough motivation :D But seriously, it could take quite a bit of time to generate the BLAST or diamond database, but it is feasible. Alternative would...
These will contain metatranscriptomes, RNAseq, metagenomes and possibly a few more exotic sequence datasets (ChIP-seq). Selection was automated based on sequences which were detected within the library (i.e. Coronavirus reads),...
@harryjubb I think is right, I put up a "Caution" note on the [install instructions for VSCode](https://biosyntax.org/install#vscode).
Hi @avinashsingh77 , this is actually non-critical these days. Most relevant issues for starting out are probably here: https://github.com/serratus-bio/serratus.io/issues Shoot me an email artem AT rRNA dot ca and I...
You should have gotten an invite a week ago or so, check spam
For human?
can you rename your fast file extension to `.faa` and try again?
Yeah it's all in the terraform: https://github.com/ababaian/serratus/blob/master/terraform/main/main.tf and we report the specifics of the cluster in the paper. Also depending on what your query fasta file and type of libraries...
That's kind of a carry-over from earlier work. If you're doing cufflinks assembly then the strand information is kind of redundant since splice junctions will tell you which strand the...