About simplify function in clusterprofiler 4.0

Open chiasadoo opened this issue 4 years ago • 4 comments

when I use enrichGO() with ont = "ALL", the simplify() method error with: simplify only applied to output from gsegO and enrichGO..., when I change the ont="ALL" to ont="BP" or any other category, this error never appears. Is there any bug? Or I just used it in wrong way?

Jul 14 '21 05:07 chiasadoo

ont = 'ALL' currently not supported.

Jul 14 '21 06:07 GuangchuangYu

@GuangchuangYu I observe this scenario even in clusterProfiler version 4.2.2. Is this as expected? If yes, can we expect this to resolve in the future release?

Mar 02 '22 12:03 peranti

@peranti We have supported it in the Github version.

Mar 04 '22 06:03 huerqiang

Thanks, @huerqiang. Could you please update us once it is live?

Mar 04 '22 11:03 peranti