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Problems with the function "insert_left"

Open lisch7 opened this issue 2 years ago • 0 comments

When using the aplot package (version 0.2.0), the following error message appears when using the function "insert_left":

Error in if (zero_range(as.numeric(limits))) { : 
  missing value where TRUE/FALSE needed
In addition: Warning message:
In zero_range(as.numeric(limits)) : NAs introduced by coercion

We have a matrix to plot heatmap like this:

image

And then we use the following code to generate the cluster tree:

  dd <- dist(plotdata1, method = "euclidean")
  hc <- hclust(dd, method = "ward.D2")
  
  library(ggdendro)
  pa=ggdendrogram(hc,theme_dendro = F)+
    coord_flip()+
    scale_y_reverse()+
    theme_void()
image

Then the heatmap plot was plotted using the following code:

plotdata1 %>% ggplot(aes(x=condition,y=celltype))+
    geom_tile(aes(fill = value),color = tile_color)+
    scale_y_discrete(expand = c(0,0),position = "right")+
    scale_x_discrete(expand = c(0,0))+
    theme_bw()+
    theme(
      panel.grid = element_blank(),
      axis.title = element_blank(),
      axis.ticks.length = unit(0.15,"cm"),
      axis.text.y.right = element_text(size = 12,colour = "black"),
      axis.text.x.bottom = element_text(size = 12,colour = "black",angle = 0,hjust = 0.5)
    )
image

And if I want to combine the two plot, Error was occured:

>insert_left(pb,pa,width = relative_width)
Error in if (zero_range(as.numeric(limits))) { : 
  missing value where TRUE/FALSE needed
In addition: Warning message:
In zero_range(as.numeric(limits)) : NAs introduced by coercion

However, aplot (version 0.1.8) works fine whereas vesion 0.1.9 and 0.2.0 can't. So maybe it's necessary to solve this problem in the next vesion.

lisch7 avatar Aug 27 '23 07:08 lisch7