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DRAM2: combine_annotations.nf doesn't bind properly

Open stas-malavin opened this issue 10 months ago • 0 comments

It can't find the files to combine (they reside in the pipelene's work dir). Adding runOptions = '--bind <...>' to singularity { } doesn't help (because of singularity.autoMounts = true?) Adding containerOptions = '--bind <...>' to process { } helps. Same problem, but the solution is not working now: issues/396#issuecomment-2634239877

stas-malavin avatar Apr 07 '25 08:04 stas-malavin