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distill: AttributeError: 'list' object has no attribute 'concat'

Open marina-vn opened this issue 1 year ago • 0 comments

Hi, I'm having a problem with the distill commands that I'm not sure how to solve:

DRAM-v.py distill -i D_dv1_10/annotations.tsv -o dramv-distill 0:00:05.668115: Retrieved database locations and descriptions 0:00:36.699746: Determined potential amgs Traceback (most recent call last): File "/home/emm4/anaconda3/envs/viral-id-sop/bin/DRAM-v.py", line 153, in args.func(**args_dict) File "/home/emm4/anaconda3/envs/viral-id-sop/lib/python3.8/site-packages/mag_annotator/summarize_vgfs.py", line 240, in summarize_vgfs viral_genome_stats = make_viral_stats_table(annotations, potential_amgs, groupby_column) File "/home/emm4/anaconda3/envs/viral-id-sop/lib/python3.8/site-packages/mag_annotator/summarize_vgfs.py", line 101, in make_viral_stats_table viral_stats_series.concat(virus_data.concat(gene_counts_series)) AttributeError: 'list' object has no attribute 'concat'

marina-vn avatar Jun 24 '24 09:06 marina-vn