About the compatiblity of Dorado basecalling model

[gxAlan233]

I have a bam file which was basecalled by Dorado, and I try to run deepmod2 on it using the latest model bilstm_r10.4.1_5khz_v4.3. However the Dorado basecalling used for that bam file is v5.0 rather than v4.3. Is it still OK when the Dorado basecalling version is higer than deepmod2's model? Or do I have to basecall it again using v4.3.0 Dorado basecalling?

[umahsn]

Hi, we are training new models for v5 of Dorado. We will have the models uploaded here after we test in a few days.

[bismarck1008]

When will bilstm_r10.4.1_5khz_v5.0 be updated

[umahsn]

We have released v5 models for both bilstm (bilstm_r10.4.1_5khz_v5.0) and transformer (transformer_r10.4.1_5khz_v5.0) : https://github.com/WGLab/DeepMod2?tab=readme-ov-file#models

[bismarck1008]

Thank you so much for your help