WGLab
not running
i am getting this error if i run from umbutu
Traceback (most recent call last):
File "/mnt/c/DeepMod2/raw_data/deepmod2/train/generate_features.py", line 10, in
but mostly I am getting indent errors
Hi Jeff,
Numba package should have been installed during conda environment creation, but if that didnt happen correctly, you can install it manually by running of these two commands in terminal while deepmod2 environment is activated:
pip install numba
or
conda install numba
I finally got it working on the laptop. I think that the issue was I closed a window and needed to type in : conda activate deepmod2
is there an equivalent command for my pc /linux, which seems to have the same issue after an update?
From: Mian Umair Ahsan @.> Date: Thursday, April 11, 2024 at 12:07 PM To: WGLab/DeepMod2 @.> Cc: Field, Jeffrey Michael @.>, Author @.> Subject: Re: [WGLab/DeepMod2] not running (Issue #23)
Hi Jeff,
Numba package should have been installed during conda environment creation, but if that didnt happen correctly, you can install it manually by running of these two commands in terminal while deepmod2 environment is activated:
pip install numba
or
conda install numba
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The same commands should also work in LINUX if the numba package is missing.
Just got it working again. The issue again was the command: conda activate deepmod2
From: Mian Umair Ahsan @.> Date: Friday, April 12, 2024 at 4:03 PM To: WGLab/DeepMod2 @.> Cc: Field, Jeffrey Michael @.>, Author @.> Subject: Re: [WGLab/DeepMod2] not running (Issue #23)
The same commands should also work in LINUX if the numba package is missing.
— Reply to this email directly, view it on GitHubhttps://urldefense.com/v3/__https:/github.com/WGLab/DeepMod2/issues/23*issuecomment-2052448307__;Iw!!IBzWLUs!UQyfwGXRs2wLG2-GwpTDpEOrJDdwwIfwcmpXdSGI3HeI71AwHLO31WqtbQTShlmERs3puQGvyNLFABjh8IA9-NWa$, or unsubscribehttps://urldefense.com/v3/__https:/github.com/notifications/unsubscribe-auth/AO6NFLRLY5O6UADZQ4AMZILY5A4XTAVCNFSM6AAAAABGBDISRWVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDANJSGQ2DQMZQG4__;!!IBzWLUs!UQyfwGXRs2wLG2-GwpTDpEOrJDdwwIfwcmpXdSGI3HeI71AwHLO31WqtbQTShlmERs3puQGvyNLFABjh8PbaL91G$. You are receiving this because you authored the thread.Message ID: @.***>