Detect collisions and atlas setting selection are not persisted between runs

[kjy5]

Some settings don't seem to be saving

• Probe collision toggle (defaults to "on" / "detect collisions")
• Atlas selection (defaults to the null transform)

There might be more I am not seeing

[dbirman]

We're going to default to the null transform going forward I think, we don't have an in vivo transform right now for the rat atlas and I want to be consistent across atlases for what we do. Hopefully it's obvious to people because the axes are rotated

[dbirman]

I'm kind of hoping this clues more people in to the fact that they have to pay attention to the transform as well...

[dbirman]

• [ ] Collisions issue
• [x] Atlas issue