debrowser
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UMMS-Biocore
Differential Count Data Analysis Toolbox
I am trying to do an GOenrichment for my RNA-Seq (Arabidopsis) and am having trouble with the application in DEBrowser. In the online version, I get an error that I...
When trying to upload a large (~100 MB) count data file, shiny reports that the maximum upload size is exceeded. 
Hi everybody please I need your help I am a beginner in bioinformatics and R, so my issue is that I have a dataset as you see in my screenshot...
Hi, the DEBrowser is very useful. howeve,I found that I could not choose some other species, such as cattle, pigs and chickens, when I was doing GO enrichment analysis ?...
To solve the installation problem about d3heatmap. You can use the commands below; ``` if (!require("devtools")) install.packages("devtools") devtools::install_github("rstudio/d3heatmap") if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("debrowser") ```
Hi, thanks for the DEBrowser app, it is wonderful. I see I can download tables for up and down differentiated genes: can I download a table of only non-significant genes?...
Hello, I have selected a tab-delimited count table and a tab-delimited metadata file for upload to your web instance of DEBrowser. The status bar below each selected files states 'upload...
Hello, I encountered the above error while running DESeq. I know it's because I manually made the row.names of my matrix the name of the genes, but the example file...
Hello, Thank you for the great package! It's really nice to give non-computational people ability to analyse RNA-seq data. Though, is there any way to save analysis for future repeating?...
