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SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.

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2.2.2 build issues

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Trying to build this on the HPC running CentOS 7 that i manage, and the instructions arent working: [root@cc-dclrilog61 samstat]# module list Currently Loaded Modulefiles: 7) hdf5_18/1.8.20 8) gcc/8.2.0 9)...

MrDotOne avatar MrDotOne

Feature request: plot fraction of reads on the y-axis and choose bin size for error plotting

Hi, It would be great to be able to view the error plots normalised by the total reads in the bin. In addition for long reads it would be useful...

osilander avatar osilander

Image for readme.mde

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[] ![example](https://user-images.githubusercontent.com/8110320/33819832-69b39698-de87-11e7-9dfd-bdc330bfe78c.jpg)

TimoLassmann avatar TimoLassmann

Conda availability

Please add `samstat` to conda: conda install -c bioconda samstat Thanks.

bounlu avatar bounlu

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verified publisher icon TimoLassmann

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SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.

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