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verified publisher icon TIO-IKIM

ROI Support

Open KompressorSC opened this issue 1 year ago • 2 comments

Hi,

I really appreciate your work. Recently I am trying to use CellViT to run inference on ROIs, but I don't know how to modify the pipeline. May you give some advices?

KompressorSC avatar Aug 07 '24 13:08 KompressorSC

Hi, can you be more specific and explain what you mean with ROI? Do you have an anonymized example file you could share with me?

FabianHoerst avatar Aug 08 '24 14:08 FabianHoerst

Hi, I want to use CellViT to segment ROI, but I find the model can only segment WSI. How can I modify it to segment ROI? I’ll provide some anonymized example files later.

---- Replied Message ---- | From | Fabian @.> | | Date | 08/08/2024 22:12 | | To | TIO-IKIM/CellViT @.> | | Cc | Sicheng @.>, Author @.> | | Subject | Re: [TIO-IKIM/CellViT] ROI Support (Issue #52) |

Hi, can you be more specific and explain what you mean with ROI? Do you have an anonymized example file you could share with me?

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KompressorSC avatar Aug 10 '24 03:08 KompressorSC

Hi, I worked it out by myself. I will close this issue. Thanks.

KompressorSC avatar Aug 26 '24 09:08 KompressorSC