Add references to software for post-spike-sorting Neuropixels data analysis

[m-beau]

Hey there,

Following our email chat, here is a list of useful Neuropixels data analysis software that could be referenced at the end of the 'Analysing Neuropixels datasets' section of spikeinterface's documentation:

• Quality control
  • Manual curation GUI: Phy, docs. Example workflow here.
  • Bombcell: automated quality control, wiki
  • IBL quality metrics
• Loading, analyzing and plotting data
  • NeuroPyxels
  • Spikes

You could also add a reference to this more general 'curated list of Neuropixels resources' from Julie: https://github.com/Julie-Fabre/awesome_neuropixels

Cheers!

[zm711]

Any interest in adding these to the docs in a PR. I think we are all swamped and this would be a great way to contribute!

[tayheau]

Hey, idk if the idea still holds, but should the outside references be cited inside there "corresponding" module or should we group them in a new section "References" ?

[alejoe91]

Hi @tayheau

I would lean towards just adding the awesome_neuropixels link at the end of the Analyzing Neuropixels datasets tutorial. There is no point in duplicating the resources and that has all of them!