Extension should look for templates relatively or by setting.

[IngoVals]

I'm using Webpack to build my theme so I have the liquid files inside a /src/static directory. I keep these static files in the same directory structure as they will be built as.

{% comment %} Inside theme.liquid {% endcomment %}
{% section 'header' %}

So theme-check extension checks my code automatically and gives me a MissingTemplate.

Since this file is located at src/static/layout I would like theme check to look in src/static/sections/header.liquid

If that is not possible maybe a base url setting for the extension for which theme check will be ran in.