adapt parameters_io

[annawendler]

Changes and Information

• RKI reports deaths with respect to the infection date of the respective person. We shift the reported data according to the respective mean stay times to get information on when people died.
• Depending on the chosen transition distributions and the start date we need data points before reporting of Covid cases started. We set these data points to 0.
• Compute flow ExposedToInfectedNoSymptoms from -2*global_support_max,...,0 to allow correct initialization of flow InfectedNoSymptomsTorecovered.

Merge Request - Guideline Checklist

Please check our git workflow. Use the draft feature if the Pull Request is not yet ready to review.

Checks by code author

• [x] Every addressed issue is linked (use the "Closes #ISSUE" keyword below)
• [x] New code adheres to coding guidelines
• [x] No large data files have been added (files should in sum not exceed 100 KB, avoid PDFs, Word docs, etc.)
• [x] Tests are added for new functionality and a local test run was successful (with and without OpenMP)
• [x] Appropriate documentation for new functionality has been added (Doxygen in the code and Markdown files if necessary)
• [x] Proper attention to licenses, especially no new third-party software with conflicting license has been added
• [ ] (For ABM development) Checked benchmark results and ran and posted a local test above from before and after development to ensure performance is monitored.

Checks by code reviewer(s)

• [ ] Corresponding issue(s) is/are linked and addressed
• [ ] Code is clean of development artifacts (no deactivated or commented code lines, no debugging printouts, etc.)
• [ ] Appropriate unit tests have been added, CI passes, code coverage and performance is acceptable (did not decrease)
• [ ] No large data files added in the whole history of commits(files should in sum not exceed 100 KB, avoid PDFs, Word docs, etc.)
• [ ] On merge, add 2-5 lines with the changes (main added features, changed items, or corrected bugs) to the merge-commit-message. This can be taken from the briefly-list-the-changes above (best case) or the separate commit messages (worst case).

Closes #1087

[codecov[bot]]

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 96.44%. Comparing base (a029aa6) to head (444e0c6). Report is 2 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #1095      +/-   ##
==========================================
+ Coverage   96.42%   96.44%   +0.01%     
==========================================
  Files         132      135       +3     
  Lines       11055    11286     +231     
==========================================
+ Hits        10660    10885     +225     
- Misses        395      401       +6     

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