VISTA icon indicating copy to clipboard operation
VISTA copied to clipboard

MONAI Versatile Imaging Segmentation and Annotation

Results 14 VISTA issues
Sort by recently updated
recently updated
newest added

updates: - [github.com/pre-commit/pre-commit-hooks: v4.4.0 → v4.5.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.4.0...v4.5.0) - [github.com/psf/black: 23.3.0 → 24.3.0](https://github.com/psf/black/compare/23.3.0...24.3.0) - [github.com/pycqa/isort: 5.12.0 → 5.13.2](https://github.com/pycqa/isort/compare/5.12.0...5.13.2) - https://github.com/charliermarsh/ruff-pre-commit → https://github.com/astral-sh/ruff-pre-commit - [github.com/astral-sh/ruff-pre-commit: v0.0.261 → v0.3.5](https://github.com/astral-sh/ruff-pre-commit/compare/v0.0.261...v0.3.5) - [github.com/asottile/yesqa: v1.4.0 → v1.5.0](https://github.com/asottile/yesqa/compare/v1.4.0...v1.5.0)

**Describe the bug** Failed to run inference in MONAI Label Server, reported **RuntimeError: Expected all tensors to be on the same device, but found at least two devices, cuda:0 and...

https://github.com/Project-MONAI/VISTA/blob/1e7f3cc3ec10c5e9b3bc89b14fdeb2949e45a8e2/monailabel/monaivista/lib/model/vista_point_2pt5/inferer.py#L94 this line use too much memory when image is big ![image](https://github.com/Project-MONAI/VISTA/assets/8953923/51f1a0d2-ff2f-4004-8224-2e28ed44c9c6) ![image](https://github.com/Project-MONAI/VISTA/assets/8953923/f33db5e9-8a2d-4dcc-8685-159582cd57b1) the definition of variable "pred_volume“ varies in different functions. it is 104 channel prob logits at beginning,...

Fixes #17 ### Description monailabel/utils/others/generic.device_map() returns "cuda:x" in case of multiple gpus, accordingly, the compare with device == "cuda" fails in monaivista....inferer.py and monaivista....utils.py. As a result the inputs for...

**Describe the bug** Input of promt_encoder is on wrong device if more than 1 cuda device is available. Inference Fails. **To Reproduce** Run fully integrated pipeline using the slicer plugin...

### Description Remove hard coded class counts, which should help to extend vista to more classes. ### Types of changes - [x] Non-breaking change (fix or new feature that would...

when setting batchsize more than 1,will report an error“RuntimeError: stack expects each tensor to be equal size, but got [1, 185, 128, 101] at entry 0 and [1, 249, 188,...

**Describe the bug** currently there are two different copies of 'segment_anything', would be great to unify the usage and try to avoid direct modifications (use import and inheritance if possible)...

I see this [MONAI Label Slicer Module](https://github.com/Project-MONAI/VISTA/tree/main/monailabel/plugins/slicer) version is quite similar to the one published in [MONAI Label](https://github.com/Project-MONAI/MONAILabel/tree/main/plugins/slicer). It causes less confusion/friction if we only have a single MONAI Label...

enhancement

### Description Adds TRT acceleration. Depends on https://github.com/Project-MONAI/MONAI/pull/7990 ### Types of changes - [x] Non-breaking change (fix or new feature that would not break existing functionality). - [ ] Breaking...