aslprep
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PennLINC
Preprocessing of arterial spin labeling (ASL) data
Dear ASLprep team, we use 5 multi-delay pCASL (repeat is 2 2 2 3 3), and I add the delay time for each volume (according to BIDS) in json file...
Hello, the most recent FSL version 6.0.5.1 had some pertinent updates to ASL processing. Is it possible to update the FSL version in the aslprep container? Thank you.
The PennLINC lab has experienced some staff turnover recently, so we haven't had anyone to maintain ASLPrep recently. I'll be taking over that role in early 2023. Sorry for the...
Resolves #191 Also seen in https://github.com/nipreps/smriprep/pull/214 When running aslprep with the `--anat-derivatives` flag, the wrong tissue labels are being used.
After running aslprep v0.2.7 with the `--anat-derivatives` flag (using previously pre-processed anatomical outputs from fmriprep), we noticed that we were getting similar values in the `quality_control_cbf.csv` for `GMmeanCBF` and `WMmeanCBF`....
I have a 2D PCASL dataset processed through ASLPrep. However, it looks like the slice-timing information is used to run AFNI's 3dTshift on the raw tag/control data, but not to...
I try to run aslprep, but it always shows 'aslprep: error: Path does not exist', but it actually exist. Does anyone what might cause the issue? I guess it's a...
Dear aslprep-team, we want to use aslprep in order to analyse our PCASL data. We are running aslprep over docker on Linux. Unfortunatly, we get an error of the cbf_computation...
Hi, At my site, someone edited a nifti json sidecar and accidentally inserted a smart-quote. I obviously don't expect ASLprep to run, but it would be **really** nice if when...
