Nebula

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Hi, when I run the preprocessing step: `nebula preprocess --bed genotypes.t2t.bed --bam HG002.minimap2.t2t.sorted.bam --workdir tmp --reference chm13v2.0.fa --threads 40` Nebula stop and throw the exception:  I have built the...

quanc1989

Reducing memory consumption

1

Hi, I am trying to run the preprocessing step of nebula on a BAM with long reads, in order to later on call it on short read BAMs. However, I...

cassisnaro

Error while compiling

4

I am getting the following error when I build Nebula i.e. execute `make` in `cpp` directory. I am running on my Macbook, so changed `g++` to `clang++ -Xpreprocessor` and also...

srbehera

build error

3

Hi, I am not able to build with gcc version: `gcc (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0` as I get the following error: ``` $ make g++ -std=c++11 -O3 -funroll-loops -fopenmp -I./htslib -o...

brentp