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Error when running Rscript

Open carolinasisco opened this issue 3 years ago • 3 comments

Hello, I was trying to run the Rscript provided for visualizing conserved regions using the following command line:

Rscript visualize.R ~/nocardia/ragtag_output/ragtag.scaffold.fasta ~/nocardia/nfarcinica.fasta ~/nocardia/fastANIresult.visual

However, I got:

Error: unexpected '<' in "<" Execution halted

Any suggestions? Thanks

carolinasisco avatar Apr 30 '22 22:04 carolinasisco

Can you share the two genomes, FastANI version, and the commands executed?

cjain7 avatar May 01 '22 05:05 cjain7