OpenGene - Open Source Genomics Toolbox

Please switch to https://github.com/OpenGene/defastq

OpenGene

(No maintenance) Detect gene fusion directly from raw fastq files

OpenGene

Query Mutated Reads from a Bam

OpenGene

A fast lossless FASTQ compressor with ultra-high compression ratio

OpenGene

(No maintenance) Next Generation Sequencing Simulation with SNP, Variation and Sequencing Error Integrated

OpenGene

Generate unique KMERs for every contig in a FASTA file

OpenGene

Detect and visualize microsatellite instability(MSI) from NGS data

OpenGene

A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis

OpenGene