elephant

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change_point_detection, update reference

1

Updated reference in docstring, and added DOI to elephant.bib file entry.

Moritz-Alexander-Kern

Fix/docstring warnings

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This PR fixes mostly indentation errors in several doc-strings. The content of the documentation is not affected. **Before:** when building the documentation with: ``` cd doc && make html ```...

Moritz-Alexander-Kern

Allow passing spike rates directly to gpfa

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Hi there -- I made a little edit to the gpfa class that allows spike rates to be passed in directly, bypassing the first step of the processing. This would...

jonahpearl

OPT/UnitaryEventAnalysis: optimize calculation/rounding of 'n_bins' in 'jointJ_window_analysis()' function

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This **(optional)** pull request presents an alternative and numerically more stable way to calculate the number of bins 'n_bins' within the 'jointJ_window_analysis()' function in 'elephant/unitary_event_analysis.py' module. It uses the 'round_binning_errors()'...

ojoenlanuca

Enh/add doctest runner

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## CI workflow doctests added workflow to run doctests on all examles merge after PR #502 .

Moritz-Alexander-Kern

Fix/doctests formatting only

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## Fixed various doctests This PR contains a subset of the fixes from PR #497 , here only the ones with changed formatting are contained. **How to run only doctests**...

Moritz-Alexander-Kern

enh/upload docs .html-files as artifact

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**Upload docs html-files as artifact to github** This PR adds [upload-a-build-artifact](https://github.com/marketplace/actions/upload-a-build-artifact) action to build-docs workflow. After docs are build on github actions, the html-files can be downloaded as a build...

Moritz-Alexander-Kern

Fix/add option: do not compile fim c-extension

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This PR adds an extra to elephant, which allows installation of Elephant without compiling the c++ extension `fim.cpp` used in SPADE. Do not compile any extension: - development `pip install...

Moritz-Alexander-Kern

Use new `elephant.utils.calculate_n_bins` in `statistics.instantaneous_rate`. The new utils function is added with PR #489, merge this PR afterwards.

Moritz-Alexander-Kern

Feature WPLI

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To further increase the number of functions in the phase_analysis module of ‘elephant’, we implemented the ‘weighted_phase_lag_index()’-function to calculate the WPLI, which is a measure of phase-synchronization and based on...

ojoenlanuca