pykilosort
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WIP: Python port of Kilosort2
Fixes issue of version number compliance with PEP440, addresses Issue #77
Error thrown during import by pydantic since type annotation was missing for field 'ntbuff' in params.py. Simple fix. ``` import pykilosort File "", line 1, in File "pykilosort/__init__.py", line 12,...
PEP 440 - the format for the versioning in this package does not have support in new versions of pip
Notice from a slightly older version of pip (0.22.x): ```bash /usr/lib/python3/dist-packages/setuptools/dist.py:507: UserWarning: The version specified ('ibl_1.3.0') is an invalid version, this may not work as expected with newer versions of...
I can't run the code, because of the KeyError:'sample2volt'. Auto-detection of noisy channels: 0%| | 0/25 [00:00
As the title suggests, during the splitting template process CUDA throws memory error. I think it's due to cluster having too many spikes. GPU has 4G memory (also tried with...
Hi Everyone I'd like to analyze neuropixels data on server. Our server has seemingly 144 cores but does not have (does not need to have) a powerful GPU, or may...
added main files for running the classifier. Things to do: 1. call the classifier function in the main pipeline after most of the processing before exporting to phy 2. add...
V1 working version of datashift. Probably could use a) a couple more unit tests and b) better integration with the sorting flow. Check for: - off-by-one errors - untested branches
When use "python setup install" via the command line, the "cuda" file and its contents do not make their way to the installation (in my case, "./conda/lib/sitepackages..."). I was able...
Hi there, I want to run the example files but there is no test recording the URL is an invalid one. So where can I find the test recording? Thank...
