ModelSEEDpy
ModelSEEDpy copied to clipboard
Python package for building and analyzing models using ModelSEED
I believe that the MSCommunity code is dependent on several new functions in MSModelUtl.
I had to make these changes to make the code work, but there's a chance that I got it wrong
Hi there. I was wondering if there's any way one could get the model's reactions that belong to a certain pathway as in the following screenshot from the web interface:...
only allow spontaneous reaction if all substrates are present in the metabolism
The link of functionalities can not be found. [Python Notebooks](https://github.com/ModelSEED/ModelSEEDpy/examples)
Hi! Using the attached `.faa` file and through the ModelSEED platform I built the also attached `.sbml` growing model. I am now trying to reproduce that through the CLI and...
Bugs
Hello! I merged the upstream MSpy into my fork and was reacquainted with some bugs that I corrected in my fork. A few of them here: 1. `Self` is already...
This adds a pull request template from the kb_uploadmethods app referenced [here](https://github.com/kbaseapps/kb_uploadmethods/blob/master/.github/pull_request_template.md). Signed-off-by: David ML Brown Jr
Adding "pigment" and "carbohydrate" to biomass composition because of cyano template