Updating R Scripts with New h5 Matrices

Open jasonhan3 opened this issue 3 years ago • 0 comments

When I download an R script to read gene expression data for human data, the initial variables are as follows:

destination_file = "human_matrix_v10.h5" extracted_expression_file = "GSE30017_expression_matrix.tsv" url = "https://s3.amazonaws.com/mssm-seq-matrix/human_matrix_v10.h5"

I see that on the ARCHS4 downloads page there is a "human_matrix_v11.h5" available. Should the h5 file that the R script prompts the user to download be the updated "v11" data?

Jun 10 '22 14:06 jasonhan3