readfish Example barcode balancing

Hi,

We are interested in using the barcode balancing feature in amplicon ONT workflows. It is not clear to me in the documentation whether or not the barcode balancing with readfish requires an input file as it is a form of adaptive sampling.

If an input file (fasta, mmi) is required, what should it contain?

Barcode sequences
Barcode + amplicon sequences

Thank you for the clarification.

Amy

Feb 10 '24 11:02 ahfitzpa

Thank you for your issue. Give us a little time to review it.

PS. You might want to check the FAQ if you haven't done so already.

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Mar 17 '24 11:03 mattloose

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