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datasets in scRNAseq can't be retrived for reference mapping

Open tufeiyinjie opened this issue 2 years ago • 1 comments

Hi,

I tried to leverage the singleR package to add the annotation to data. Instead of using the built-in data, I want to use HeOrganAtlasData (including different human organs) for reference mapping, because my data was human liver. listDatasets() function returns the datasets, including HeOrganAtlasData. However, when I run HeOrganAtlasData(), it can't be retrieved. Could you give me a hint to fix that?

Thanks, Fei

tufeiyinjie avatar Mar 09 '23 02:03 tufeiyinjie

See here on creating a minimal reproducible example of your problem.

LTLA avatar Mar 13 '23 07:03 LTLA