Can't load library(multiMiR)
library(multiMiR) Error: package or namespace load failed for ‘multiMiR’: .onLoad failed in loadNamespace() for 'multiMiR', details: call: function (type, msg, asError = TRUE) error: Recv failure: Connection was reset R:4.4.1 Rtools:4.4 China
example1 <- get_multimir(org = "mmu",
- mirna = 'mmu-miR-709',
- table = "validated",
- summary = TRUE)
Searching mirecords ...
Error in
map(): ℹ In index: 1. ℹ With name: mirecords. Caused by error: ! Recv failure: Connection was reset Runrlang::last_trace()to see where the error occurred.
@wuds2006 In the next version(v1.27.2) which will be available in BioConductor 3.20 I extended the connection timeout that I suspect causes the connection reset issues. Do you mind to try the new version? If not update to BioConductor 3.20 when it's released later this month.
Alternatively you could try to extend the timeout. I have not tested this, but running
options(timeout = 180)
Should extend the timeout for the multiMiR connection. You can increase the value further if needed.
@wuds2006 In the next version(v1.27.2) which will be available in BioConductor 3.20 I extended the connection timeout that I suspect causes the connection reset issues. Do you mind to try the new version? If not update to BioConductor 3.20 when it's released later this month.
Alternatively you could try to extend the timeout. I have not tested this, but running
options(timeout = 180)Should extend the timeout for the multiMiR connection. You can increase the value further if needed.
I used bioconductor version 3.20 and downloaded multiMiR version 1.28.0 at the same time. However, an error is still reported when loading the package,and then i can't use get_multimir function