ktab.1 is missing when running hetmer

[Kendall-Lee]

Hi, I am trying to follow the template script exactly. FastK seems to have run with no problem but only produces a single ktab file and a single hist file. So when I run hetmer it gives this error message:

(smudgeplot) [klee@int0001 Smudgeplot]$ smudgeplot.py hetmers -L 12 -t 4 -o FastK/kmerpairs --verbose FastK/B791_merge1.ktab
Running smudgeplot v0.4.0dev
Task: hetmers
Calling: hetmers (PloidyPlot kmer pair search)  -oFastK/kmerpairs -e12 -T4 -v FastK/B791_merge1.ktab
PloidyPlot: Table part FastK/.B791_merge1.ktab.1 is missing ?

Done!

Any help would be appreciated!

[KamilSJaron]

Hi @Kendall-Lee, sorry about the slow reponse.

How did you generate FastK/B791_merge1.ktab? If you look ls -la do you see the files? FastK generates all the database files as . files, so you don't see them, by default. Also, merge suggests it's merged file, right? Did you create the histogram from the same database?