ITKTubeTK

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Eliminating this warning: tubeSegmentConnectedComponentsUsingParzenPDFs_ext.i(78) : Warning 404: Duplicate template instantiation of 'vector< itkImageF4_Pointer >' with name 'vectoritkImageF4' ignored, itkImage_ext.i(560) : Warning 404: previous instantiation of 'vector< itkImageF4_Pointer >' with name...

aylward

No matching distribution found

5

Hello, I am having trouble with installing the latest version of itk-tubetk. When I create a new conda environment with python 3.9, `pip install itk-tubetk==1.3.5` throws this error ``` ERROR:...

soojinpren

gap appears when I generate the nii.gz file from .tre when using TubeTK

8

Thank you for sharing your excellent project professor! I meet the same problems as [Subhashis-Banerjee] [https://github.com/InsightSoftwareConsortium/ITKTubeTK/issues/81](url) when I try to generate the label image from .tre my .mha and .tre...

jinshuozhang

Extract the centerline using TubeTK

3

Hello, Thanks very much for your example. I have experience with both ITK and Simple ITK, but not TubeTK. The documentation for TubeTK seems a bit sparse. Does the following...

keesh-elucid

Hi, thank you for sharing the great work! I tried to use the codes to segment artery vessels in the ultrasound section images, but I couldn't find any examples in...

Leong1230

Does the example in Demo-ImageRegistration.ipynb realize vessel-based image registration?

YingChen7

There tool contains different versions of license headers, some using the pre-NumFOCUS ITK header, others using different versions specific headers, e.g.: https://github.com/InsightSoftwareConsortium/ITKTubeTK/blob/7536c6c112e1785cead4d008e8fae5ca8f527f20/include/tubeComputeBinaryImageSimilarityMetrics.h https://github.com/InsightSoftwareConsortium/ITKTubeTK/blob/7536c6c112e1785cead4d008e8fae5ca8f527f20/include/tubeComputeBinaryImageSimilarityMetrics.hxx https://github.com/InsightSoftwareConsortium/ITKTubeTK/blob/7536c6c112e1785cead4d008e8fae5ca8f527f20/include/tubeComputeImageSimilarityMetrics.h https://github.com/InsightSoftwareConsortium/ITKTubeTK/blob/7536c6c112e1785cead4d008e8fae5ca8f527f20/include/tubeComputeTrainingMask.hxx https://github.com/InsightSoftwareConsortium/ITKTubeTK/blob/7536c6c112e1785cead4d008e8fae5ca8f527f20/include/tubeComputeTubeFlyThroughImage.h https://github.com/InsightSoftwareConsortium/ITKTubeTK/blob/7536c6c112e1785cead4d008e8fae5ca8f527f20/src/Common/tubeIndent.cxx Some of these...

jhlegarreta

Update github actions to v5.4.4 and package management for python 3.9

hjmjohnson