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verified publisher icon Illumina

Inability to view genotypes in the title

Open mram6 opened this issue 4 years ago • 0 comments

Hi @virajbdeshpande ExpansionHunter produced genotypes (for the same sample) at 10x, 15x and 30x, but in GraphAlignmentViewer genotype is given only for 10x and not for 15x and 30x. Input used was the realigned bam file from Expansion Hunter in each case and variant catalog. (Was run as a single sample at each coverage). Why is it so & how to view genotypes at 15x and 30x too?

mram6 avatar May 27 '21 23:05 mram6