Preset for PacBio CCS?

Open armintoepfer opened this issue 6 years ago • 1 comments

Hi!

Do you have parameter recommendations for long accurate reads such as HiFi PacBio reads of ~15kb >Q20?

Thank you, Armin

Apr 29 '19 12:04 armintoepfer

Hello,

Currently, we do not have a special setting for HiFi PacBio. Please use the PacBio presetting as fallback until we have fixed this issue. However, special settings for HiFi PacBio are only expected to deliver improved runtimes. We do not expect improvements with respect to accuracy. We will look into this matter shortly.

Best wishes, Arne and Markus

Apr 29 '19 14:04 MarkusRainerSchmidt