ubergraph issues

I was just playing around and thought it could be interesting to have a place to share those queries openly. Is there already a place like that? There is an...

lubianat

Add simple subsumption GLRC query

Simple Union of SubClassOf and part_of

dosumis

Add bridges between Uberon/CL and taxon-specific anatomy ontologies.

9

This PR adds the Uberon-provided bridges that link Uberon/CL and all the taxon-specific anatomy/development ontologies that are already included in Ubergraph. The added bridges are for: * MA * WBbt/WBls...

gouttegd

Update Biolink version

The version of Biolink model included in Ubergraph is quite out of date.

balhoff

Update cell_by_location.rq

Updating to be more generic. My aim is a generic cells by type/location query. The default option with no location does depend on all cell types being part of some...

dosumis

cell_by_type_location_species.rq should come with a health warning

in_taxon is rarely enough used that this will return quite limited sets of terms - many less than most users would naively expect. A more satisfactory fix for this will...

dosumis