future.batchtools

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steps to speed up job submission?

13

I'm using `future.batchtools` via `drake`, and just got my first plan running on the cluster. It seems to take about one minute for each job submitted, and since I'm trying...

brendanf

**Describe the bug** When used with promises package, future.batchtools complains about a missing option "background" to `nbrOfWorkers()` and secondly about a missing function `nbrOfFreeWorkers()` **Error Message** `Unhandled promise error: nbrOfFreeWorkers()...

michaelmayer2

Slurm readLog() Error - Option to change fs.latency & scheduler.latency from batchtools_slurm or future::tweak

8

After a lot of troubleshooting I've submiited a related bug report/feature request [here](https://github.com/mllg/batchtools/issues/273#issue-903023047) at batchtools. Long story short, jobs submitted via future.batchtools are timing out in readLog, even though the...

stuvet

Add nbrOfFreeWorkers()

1

Implement `nbrOfFreeWorkers()` for batchtools future. This requires future (>= 1.21.0).

HenrikBengtsson

workers is not respected by future() - only future_lapply()

1

# Issue Argument `workers` is not respected by `future()` - only `future_lapply()`. # Action * [ ] Add internal future registry, cf. future.callr. * [ ] Add package tests, if...

HenrikBengtsson

HenrikBengtsson

batchtools templates: `resources[["asis"]]` for as-is declarations

1

# Issue There is no standard for how **batchtools** resources are used in the batchtools templates. This means that we all have slightly different templates and ways to declare the...

HenrikBengtsson

```sh $ cat inst/templates/sge.tmpl ## Shell: #$ -S /bin/bash # Run this as a bash script (required) ## Job name: #$ -N ## Merge standard error and output: #$ -j...

HenrikBengtsson

I am trying to run the example code in the future.batchtools Git Hub README, as follows. But I failed due to error message shown below. Could you help me out?...

haibol2016

Proposed bugfix for batchtools reveals bug in future.batchtools?

7

I have submitted a simple pull request for a [bugfix](https://github.com/mllg/batchtools/pull/276#issue-696300102) in `batchtools` which fuelled some of its behaviour mentioned in #73. I'm writing here because this proposed bugfix reveals an...

stuvet