can you guys make bambu run on command line

[yuukiiwa]

Hi @cying111, @andredsim, @lingminhao, @jonathangoeke,

As we have discussed, it will be awesome that bambu can be run on command lines without requiring users to run it on RStudio

nanoseq does it like this: https://github.com/nf-core/nanoseq/blob/master/modules/local/bambu.nf