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inquiry for using

Open adhoc0909 opened this issue 2 years ago • 4 comments

Dear Developers,

First of all, I would like to express my sincere gratitude for providing such a commendable software. However, I have encountered some issues while using it, and I am reaching out for assistance.

I have installed version 0.0.9 and have tried both the CLI and GUI versions. Firstly, with regards to the CLI version, I am encountering the following error. Debugging has proven to be quite challenging for me, so I am seeking guidance on the nature of this error and potential solutions. image

Regarding the GUI version, I receive the error message: "Inference through the graphical interface is disabled for this release, please try from the command line." This prevents the program from functioning.

Additionally, I understand that this software is capable of processing T1, T2, T1ce, and Flair data. However, the specific task I need to perform involves segmentation exclusively on T2 data. Could you kindly provide guidance on how to proceed in this scenario?

I intend to forward this message to the developers, and I have translated it into English with the utmost respect.

Thank you for your assistance.

adhoc0909 avatar Sep 17 '23 07:09 adhoc0909

Thank you for your kind words!

The FeTS model(s) only work on multi-modal data with T1, T1CE, T2, and T2-FLAIR data [ref]. It will not work if one or more of the modalities are missing.

sarthakpati avatar Sep 17 '23 19:09 sarthakpati

Thank you for your response. Is it possible to copy the T2 file, rename it to t1, t1ce, and flair, and then use the software with these renamed files? I currently only have T2 data, and I only need a segmentation task for T2.

adhoc0909 avatar Sep 18 '23 01:09 adhoc0909

You could, but I doubt you'll get any meaningful results...

And it doesn't matter if you need the segmentation for 1 modality or 4, since the model is trained to use all the 4 modalities in-tandem.

sarthakpati avatar Sep 18 '23 11:09 sarthakpati

Understand. Thank you for your reply!

adhoc0909 avatar Sep 20 '23 10:09 adhoc0909